unified cluster setup using colmena

This commit is contained in:
Jonas Juselius
2022-09-09 11:00:55 +02:00
parent ff19c52fd1
commit 980364adee
61 changed files with 966 additions and 117 deletions

202
cluster/nfs0/default.nix Normal file
View File

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{ pkgs ? import <nixpkgs> {} }:
let
# Pin the deployment package-set to a specific version of nixpkgs
# pkgs = import (builtins.fetchTarball {
# url = "https://github.com/NixOS/nixpkgs/archive/e9148dc1c30e02aae80cc52f68ceb37b772066f3.tar.gz";
# sha256 = "1ckzhh24mgz6jd1xhfgx0i9mijk6xjqxwsshnvq789xsavrmsc36";
# }) {};
# pkgs = import <nixpkgs> {};
etcdCluster = import ../etcdCluster.nix;
name = "nfs0";
address = "10.255.241.80";
in {
nfs0 = { config, pkgs, ... }: with pkgs; {
deployment.tags = [ "fs" "fs-data" ];
deployment.targetHost = address;
system.autoUpgrade.enable = lib.mkForce false;
systemd.targets = {
sleep.enable = false;
suspend.enable = false;
hibernate.enable = false;
hybrid-sleep.enable = false;
};
environment.etc = {
"minio/rootcredentials" = {
text = ''
accessKey="admin"
secretKey="en to tre fire"
'';
mode = "600";
uid = 280;
};
};
services.udev.extraRules = ''
KERNEL=="ibp65s0", SUBSYSTEM=="net", ATTR{create_child}:="0x7666"
'';
environment.systemPackages = with pkgs; [
rdma-core
hwloc
];
cluster.k8sNode = true;
features = {
host = {
inherit address;
inherit name;
};
os = {
externalInterface = "enp33s0f3np3";
nfs.enable = true;
nfs.exports = ''
/exports 10.255.241.0/24(insecure,rw,sync,no_subtree_check,crossmnt,fsid=0,no_root_squash)
/exports 10.255.243.0/24(insecure,rw,sync,no_subtree_check,crossmnt,fsid=0,no_root_squash)
'';
};
k8s = {
enable = true;
node.enable = true;
master.enable = false;
inherit etcdCluster;
};
};
# certs = {
# enable = true;
# caBundle = ./ca;
# certs = [
# {
# name = name;
# SANs = [ "${name}.cluster.local" address ];
# owner = "nginx";
# group = "nginx";
# }
# ];
# };
systemd.services.rc-local = {
description = "rc.local script";
wantedBy = [ "multi-user.target" ];
after = [ "network.target" ];
path = [ "/run/current-system/sw/" ];
serviceConfig = {
Type = "oneshot";
};
script = ''
if [ -e /sys/block/md126 ]; then
echo "deadline" > /sys/block/md126/queue/scheduler
# echo "4096" > /sys/block/md126/queue/nr_requests
echo "4096" > /sys/block/md126/queue/read_ahead_kb
echo "always" > /sys/kernel/mm/transparent_hugepage/enabled
echo "always" > /sys/kernel/mm/transparent_hugepage/defrag
fi
grep -q rdma /proc/fs/nfsd/portlist || echo "rdma 20049" > /proc/fs/nfsd/portlist
'';
};
boot.kernel.sysctl = {
"vm.dirty_background_ratio" = 5;
"vm.dirty_ratio" = 10;
"vm.vfs_cache_pressure" = 50;
"vm.min_free_kbytes" = 262144;
};
services.minio = {
enable = true;
region = "store1";
browser = true;
rootCredentialsFile = "/etc/minio/rootcredentials";
listenAddress = "0.0.0.0:9000";
dataDir = [ "/data/s3" ];
};
networking = {
hostName = name;
interfaces.enp33s0f3np3 = {
useDHCP = false;
ipv4.addresses = [ {
address = address;
prefixLength = 24;
} ];
ipv4.routes = [ {
address = "10.255.242.2";
prefixLength = 32;
via = "10.255.241.100";
} ];
};
interfaces."ibp65s0" = {
useDHCP = false;
};
interfaces."ibp65s0.7666" = {
useDHCP = false;
ipv4.addresses = [ {
address = "10.255.243.80";
prefixLength = 24;
} ];
};
firewall = {
allowedTCPPorts = [ 443 9000 9001 ];
allowedUDPPorts = [];
extraCommands = ''
iptables -I INPUT -s 10.255.241.0/24 -j ACCEPT
iptables -I INPUT -s 10.255.243.0/24 -j ACCEPT
iptables -t nat -A POSTROUTING -s 10.255.243.0/24 -j MASQUERADE
'';
};
};
# services.nginx = {
# enable = true;
# statusPage = false;
# virtualHosts = {
# "s3ui.oceanbox.io" = {
# forceSSL = true;
# enableACME = false;
# sslTrustedCertificate = "/var/lib/secrets/ca.pem";
# sslCertificate = "/var/lib/secrets/s3.pem";
# sslCertificateKey = "/var/lib/secrets/s3-key.pem";
# serverAliases = [];
# locations."/" = {
# proxyPass = "http://127.0.0.1:9001";
# extraConfig = ''
# allow all;
# '';
# };
# };
# };
# };
fileSystems = {
"/exports/data" = {
device = "/data";
options = [ "bind" ];
};
"/exports/ekman" = {
device = "/data/nfs-provisioner";
options = [ "bind" ];
};
"/exports/opt" = {
device = "/opt";
options = [ "bind" ];
};
"/vol/local-storage/vol1" = {
device = "/vol/vol1";
options = [ "bind" ];
};
};
programs.singularity.enable = true;
imports = [
../cluster.nix
./hardware-configuration.nix
];
};
}