diff --git a/applications/archmeister.yaml b/applications/archmeister.yaml
index 477b12a6..e505c10f 100644
--- a/applications/archmeister.yaml
+++ b/applications/archmeister.yaml
@@ -29,7 +29,7 @@ spec:
       sources:
       - repoURL: https://gitlab.com/oceanbox/manifests.git
         targetRevision: main
-        path: charts/archmeister
+        path: manifests/archmeister
         plugin:
           name: kustomize-helm-with-rewrite
           parameters:
diff --git a/applications/atlantis.yaml b/applications/atlantis.yaml
index d3e83336..cd1764cd 100644
--- a/applications/atlantis.yaml
+++ b/applications/atlantis.yaml
@@ -29,7 +29,7 @@ spec:
       sources:
       - repoURL: https://gitlab.com/oceanbox/manifests.git
         targetRevision: main
-        path: charts/atlantis
+        path: manifests/atlantis
         plugin:
           name: kustomize-helm-with-rewrite
           parameters:
@@ -37,9 +37,6 @@ spec:
             string: '{{ .env }}'
           - name: hostname
             string: '{{ .hostname }}'
-      - repoURL: https://gitlab.com/oceanbox/manifests.git
-        targetRevision: main
-        path: charts/atlantis/manifests
   templatePatch: |
     {{- if .autoSync }}
     spec:
diff --git a/applications/busynix.yaml b/applications/busynix.yaml
index cfd65e84..2ef61be9 100644
--- a/applications/busynix.yaml
+++ b/applications/busynix.yaml
@@ -24,7 +24,7 @@ spec:
       source:
         repoURL: https://gitlab.com/oceanbox/manifests.git
         targetRevision: main
-        path: charts/busynix
+        path: manifests/busynix
         plugin:
           name: kustomize-helm-with-rewrite
           parameters:
diff --git a/applications/cerbos.yaml b/applications/cerbos.yaml
index 968f1301..ee00f334 100644
--- a/applications/cerbos.yaml
+++ b/applications/cerbos.yaml
@@ -25,8 +25,8 @@ spec:
           chart: cerbos
           helm:
             valueFiles:
-              - $values/charts/cerbos/values.yaml
-              - $values/charts/cerbos/values-{{ env }}.yaml
+              - $values/manifests/cerbos/values.yaml
+              - $values/manifests/cerbos/values-{{ env }}.yaml
         - repoURL: https://gitlab.com/oceanbox/manifests.git
           targetRevision: main
           ref: values
diff --git a/applications/dex.yaml b/applications/dex.yaml
index d9bef516..ec70e231 100644
--- a/applications/dex.yaml
+++ b/applications/dex.yaml
@@ -11,5 +11,5 @@ spec:
   source:
     repoURL: https://gitlab.com/oceanbox/manifests.git
     targetRevision: main
-    path: charts/dex/manifests
+    path: manifests/dex/manifests
 
diff --git a/applications/geoserver.yaml b/applications/geoserver.yaml
index 90ae59b0..49676ceb 100644
--- a/applications/geoserver.yaml
+++ b/applications/geoserver.yaml
@@ -24,7 +24,7 @@ spec:
       sources:
       - repoURL: https://gitlab.com/oceanbox/manifests.git
         targetRevision: main
-        path: charts/geoserver
+        path: manifests/geoserver
         plugin:
           name: kustomize-helm-with-rewrite
           parameters:
diff --git a/applications/hipster.yaml b/applications/hipster.yaml
index 1f8b8405..d131df21 100644
--- a/applications/hipster.yaml
+++ b/applications/hipster.yaml
@@ -29,7 +29,7 @@ spec:
       sources:
       - repoURL: https://gitlab.com/oceanbox/manifests.git
         targetRevision: main
-        path: charts/hipster
+        path: manifests/hipster
         plugin:
           name: kustomize-helm-with-rewrite
           parameters:
diff --git a/applications/jaeger.yaml b/applications/jaeger.yaml
index 19962b37..91f4d6a3 100644
--- a/applications/jaeger.yaml
+++ b/applications/jaeger.yaml
@@ -14,9 +14,9 @@ spec:
     chart: jaeger-operator
     helm:
       valueFiles:
-        - $values/charts/jaeger/values.yaml
+        - $values/manifests/jaeger/values.yaml
   - repoURL: https://gitlab.com/oceanbox/manifests.git
     targetRevision: main
-    # path: charts/jaeger/manifests
+    # path: manifests/jaeger/manifests
     ref: values
 
diff --git a/applications/keycloak.yaml b/applications/keycloak.yaml
index 613c4a96..3e23167f 100644
--- a/applications/keycloak.yaml
+++ b/applications/keycloak.yaml
@@ -14,7 +14,7 @@ spec:
     chart: keycloak
     helm:
       valueFiles:
-        - $values/charts/keycloak/values.yaml
+        - $values/manifests/keycloak/values.yaml
   - repoURL: https://gitlab.com/oceanbox/manifests.git
     targetRevision: main
     ref: values
diff --git a/applications/osm-tile-server.yaml b/applications/osm-tile-server.yaml
index 0384b32a..b6e0059a 100644
--- a/applications/osm-tile-server.yaml
+++ b/applications/osm-tile-server.yaml
@@ -24,7 +24,7 @@ spec:
       source:
         repoURL: https://gitlab.com/oceanbox/charts.git
         targetRevision: HEAD
-        path: charts/osm-tile-server
+        path: manifests/osm-tile-server
         plugin:
           name: kustomize-helm-with-rewrite
           parameters:
diff --git a/applications/petimeter.yaml b/applications/petimeter.yaml
index f899fcad..050cdb9f 100644
--- a/applications/petimeter.yaml
+++ b/applications/petimeter.yaml
@@ -29,7 +29,7 @@ spec:
       sources:
       - repoURL: https://gitlab.com/oceanbox/manifests.git
         targetRevision: main
-        path: charts/petimeter
+        path: manifests/petimeter
         plugin:
           name: kustomize-helm-with-rewrite
           parameters:
@@ -39,7 +39,7 @@ spec:
             string: '{{ .hostname }}'
       - repoURL: https://gitlab.com/oceanbox/manifests.git
         targetRevision: main
-        path: charts/petimeter/manifests
+        path: manifests/petimeter/manifests
   templatePatch: |
     {{- if .autoSync }}
     spec:
diff --git a/applications/rabbitmq.yaml b/applications/rabbitmq.yaml
index 0d6fb1ed..919f5dd4 100644
--- a/applications/rabbitmq.yaml
+++ b/applications/rabbitmq.yaml
@@ -27,8 +27,8 @@ spec:
           chart: rabbitmq
           helm:
             valueFiles:
-              - $values/charts/rabbitmq/values-{{ env }}.yaml
+              - $values/manifests/rabbitmq/values-{{ env }}.yaml
         - repoURL: https://gitlab.com/oceanbox/manifests.git
           targetRevision: main
-          path: charts/rabbitmq/{{ env }}
+          path: manifests/rabbitmq/{{ env }}
           ref: values
diff --git a/applications/redis.yaml b/applications/redis.yaml
index 742b65c0..29717694 100644
--- a/applications/redis.yaml
+++ b/applications/redis.yaml
@@ -30,11 +30,11 @@ spec:
         #       - $values/redis/values.yaml
         # - repoURL: https://gitlab.com/oceanbox/manifests.git
         #   targetRevision: HEAD
-        #   path: charts/redis/{{ env }}
+        #   path: manifests/redis/{{ env }}
         #   ref: values
         - repoURL: https://gitlab.com/oceanbox/manifests.git
           targetRevision: main
-          path: charts/redis
+          path: manifests/redis
           plugin:
             name: kustomize-helm-with-rewrite
             parameters:
diff --git a/applications/seq.yaml b/applications/seq.yaml
index d080801d..2e0120ba 100644
--- a/applications/seq.yaml
+++ b/applications/seq.yaml
@@ -14,7 +14,7 @@ spec:
     chart: seq
     helm:
       valueFiles:
-        - $values/charts/seq/values.yaml
+        - $values/manifests/seq/values.yaml
   - repoURL: https://gitlab.com/oceanbox/manifests.git
     targetRevision: main
     ref: values
diff --git a/applications/sorcerer.yaml b/applications/sorcerer.yaml
index e6b5548f..ac2f7103 100644
--- a/applications/sorcerer.yaml
+++ b/applications/sorcerer.yaml
@@ -29,7 +29,7 @@ spec:
       sources:
       - repoURL: https://gitlab.com/oceanbox/manifests.git
         targetRevision: main
-        path: charts/sorcerer
+        path: manifests/sorcerer
         plugin:
           name: kustomize-helm-with-rewrite
           parameters: